Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit j | C1I57_36815 | Not Available | Positive | 5871460 - 5871830 | 13369.0 |
| fad-dependent oxidoreductase | C1I57_36820 | Not Available | Positive | 5871831 - 5872201 | 13073.1 |
| nadh-quinone oxidoreductase subunit j | C1I57_36825 | Not Available | Positive | 5872202 - 5872572 | 13369.0 |
| mfs transporter | C1I57_36830 | Not Available | Positive | 5872573 - 5872943 | 13018.3 |
| mfs transporter | C1I57_36835 | Not Available | Positive | 5872944 - 5873314 | 12958.2 |
| bax inhibitor protein | C1I57_36840 | Not Available | Negative | 5873315 - 5873685 | 12938.5 |
| duf480 domain-containing protein | C1I57_36845 | Not Available | Negative | 5873686 - 5874008 | 12081.5 |
| hypothetical protein | C1I57_36850 | Not Available | Positive | 5874057 - 5874215 | 5661.37 |
| cation transporter | C1I57_36855 | Not Available | Positive | 5874329 - 5874427 | 3669.32 |
| endopeptidase | C1I57_36860 | Not Available | Positive | 5874428 - 5874797 | 14188.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





