Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | C1I57_36765 | Not Available | Positive | 5868484 - 5868609 | 4484.51 |
| duf987 domain-containing protein | C1I57_36770 | Not Available | Positive | 5868672 - 5868857 | 7166.6 |
| ssdna-binding protein | C1I57_36775 | Not Available | Positive | 5868858 - 5868936 | 2730.02 |
| hypothetical protein | C1I57_36780 | Not Available | Negative | 5869035 - 5869229 | 7110.8 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | C1I57_36785 | Not Available | Positive | 5869230 - 5869601 | 13731.2 |
| 3-deoxy-7-phosphoheptulonate synthase | C1I57_36790 | Not Available | Negative | 5869602 - 5869973 | 13060.6 |
| hypothetical protein | C1I57_36795 | Not Available | Positive | 5869974 - 5870248 | 10407.3 |
| phosphatidic acid phosphatase | C1I57_36800 | Not Available | Negative | 5870346 - 5870717 | 13851.1 |
| fad-dependent oxidoreductase | C1I57_36805 | Not Available | Positive | 5870718 - 5871088 | 13073.1 |
| peptidoglycan editing factor pgef | C1I57_36810 | Not Available | Positive | 5871089 - 5871459 | 13082.6 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





