Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc transporter zupt | C1I57_36565 | Not Available | Negative | 5854212 - 5854529 | 10501.3 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | C1I57_36570 | Not Available | Positive | 5854530 - 5854910 | 14255.0 |
| cysteine desulfurase csda | C1I57_36575 | Not Available | Negative | 5854911 - 5855290 | 13512.1 |
| glycine--trna ligase subunit beta | C1I57_36580 | Not Available | Negative | 5855291 - 5855670 | 13583.2 |
| hypothetical protein | C1I57_36585 | Not Available | Negative | 5855671 - 5856050 | 14209.1 |
| hypothetical protein | C1I57_36590 | Not Available | Positive | 5856051 - 5856410 | 13480.3 |
| glutamate dehydrogenase | C1I57_36595 | Not Available | Positive | 5856431 - 5856810 | 14425.4 |
| glutamate dehydrogenase | C1I57_36600 | Not Available | Positive | 5856811 - 5857190 | 14425.4 |
| dna polymerase iv | C1I57_36605 | Not Available | Positive | 5857191 - 5857570 | 13922.0 |
| asma family protein | C1I57_36610 | Not Available | Negative | 5857571 - 5857950 | 14223.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





