Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein operon transcriptional activator | C1I57_36515 | Not Available | Negative | 5850320 - 5850702 | 14821.9 |
| phage shock protein operon transcriptional activator | C1I57_36520 | Not Available | Negative | 5850703 - 5851085 | 14821.9 |
| tmao reductase system periplasmic protein tort | C1I57_36525 | Not Available | Positive | 5851232 - 5851468 | 9188.34 |
| hypothetical protein | C1I57_36530 | Not Available | Positive | 5851469 - 5851851 | 13421.6 |
| hypothetical protein | C1I57_36535 | Not Available | Positive | 5851852 - 5852234 | 13421.6 |
| hypothetical protein | C1I57_36540 | Not Available | Positive | 5852235 - 5852606 | 13776.6 |
| choline dehydrogenase | C1I57_36545 | Not Available | Positive | 5852618 - 5853000 | 14057.4 |
| choline dehydrogenase | C1I57_36550 | Not Available | Positive | 5853001 - 5853383 | 13997.2 |
| esterase family protein | C1I57_36555 | Not Available | Positive | 5853384 - 5853765 | 13881.5 |
| zinc transporter zupt | C1I57_36560 | Not Available | Negative | 5853830 - 5854147 | 10529.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





