Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Phage antirepressor protein | C1I57_01345 | Not Available | Positive | 254939 - 255862 | 34976.0 |
| Tail fibers protein | C1I57_01350 | Not Available | Positive | 255963 - 258908 | 109384.0 |
| Attl | Not Available | Not Available | Positive | 270263 - 270274 | Not Available |
| Terminase large subunit | C1I57_01430 | Not Available | Negative | 271644 - 273305 | 62161.1 |
| Terminase small subunit | C1I57_01435 | Not Available | Negative | 273289 - 273645 | 13399.8 |
| hypothetical protein | C1I57_01440 | Not Available | Negative | 273765 - 273941 | 7220.58 |
| Hypothetical protein | C1I57_01445 | Not Available | Negative | 273934 - 274374 | 17179.3 |
| Head-tail connector protein | C1I57_01450 | Not Available | Negative | 274374 - 274676 | 11282.5 |
| Portal protein | C1I57_01455 | Not Available | Negative | 274669 - 275883 | 45257.7 |
| Head maturation protease | C1I57_01460 | Not Available | Negative | 275885 - 276445 | 21079.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





