Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_36000 | Not Available | Negative | 5811844 - 5812130 | 9834.7 |
| oxidoreductase | C1I57_36005 | Not Available | Positive | 5812247 - 5812611 | 13581.5 |
| oxidoreductase | C1I57_36010 | Not Available | Positive | 5812650 - 5813014 | 13567.5 |
| ribonuclease r | C1I57_36015 | Not Available | Negative | 5813198 - 5813455 | 9193.32 |
| pump protein | C1I57_36020 | Not Available | Positive | 5813602 - 5813793 | 7277.32 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | C1I57_36025 | Not Available | Positive | 5813859 - 5814260 | 14459.5 |
| rna-binding transcriptional accessory protein | C1I57_36030 | Not Available | Negative | 5814261 - 5814661 | 14482.2 |
| exodeoxyribonuclease v subunit alpha | C1I57_36035 | Not Available | Negative | 5814662 - 5815062 | 14235.8 |
| ferrochelatase | C1I57_36040 | Not Available | Positive | 5815463 - 5815645 | 6669.03 |
| acetylesterase | C1I57_36045 | Not Available | Negative | 5815620 - 5815861 | 9118.74 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





