Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail assembly protein | C1I57_35900 | Not Available | Negative | 5803975 - 5804160 | 6546.63 |
| 4,5-dopa dioxygenase extradiol | C1I57_35905 | Not Available | Positive | 5804161 - 5804567 | 14725.7 |
| glucan biosynthesis protein | C1I57_35910 | Not Available | Positive | 5804568 - 5804973 | 15035.7 |
| hypothetical protein | C1I57_35915 | Not Available | Negative | 5805134 - 5805379 | 9386.07 |
| hypothetical protein | C1I57_35920 | Not Available | Negative | 5805539 - 5805784 | 9386.07 |
| hypothetical protein | C1I57_35925 | Not Available | Positive | 5805785 - 5806188 | 14841.4 |
| zinc/cadmium/mercury/lead-transporting atpase | C1I57_35930 | Not Available | Negative | 5806230 - 5806592 | 12430.4 |
| hypothetical protein | C1I57_35935 | Not Available | Positive | 5806593 - 5806996 | 14641.6 |
| thiamine abc transporter substrate-binding protein | C1I57_35940 | Not Available | Negative | 5806997 - 5807400 | 14596.3 |
| chorismate synthase | C1I57_35945 | Not Available | Positive | 5807401 - 5807804 | 14979.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





