Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein | C1I57_35800 | Not Available | Negative | 5796093 - 5796422 | 11852.0 |
| alpha-glucosidase | C1I57_35805 | Not Available | Positive | 5796423 - 5796831 | 15451.7 |
| putrescine abc transporter permease poth | C1I57_35810 | Not Available | Negative | 5796832 - 5797239 | 15091.2 |
| 2'-5' rna ligase | C1I57_35815 | Not Available | Positive | 5797303 - 5797647 | 13593.8 |
| putrescine abc transporter permease poth | C1I57_35820 | Not Available | Negative | 5797648 - 5798055 | 15025.1 |
| flagellar biosynthesis protein flha | C1I57_35825 | Not Available | Positive | 5798074 - 5798462 | 13869.0 |
| glycoside-pentoside-hexuronide family transporter | C1I57_35830 | Not Available | Positive | 5798463 - 5798869 | 14997.7 |
| beta-galactosidase subunit alpha | C1I57_35835 | Not Available | Positive | 5798870 - 5799276 | 15386.0 |
| long-chain-fatty-acid--coa ligase | C1I57_35840 | Not Available | Negative | 5799279 - 5799683 | 14994.2 |
| hypothetical protein | C1I57_35845 | Not Available | Positive | 5799684 - 5800090 | 14977.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





