Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | C1I57_35645 | Not Available | Negative | 5786147 - 5786247 | 3830.82 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C1I57_35650 | Not Available | Negative | 5786229 - 5786561 | 11609.8 |
| pump protein | C1I57_35655 | Not Available | Positive | 5786707 - 5786910 | 7664.68 |
| riboflavin synthase | C1I57_35660 | Not Available | Positive | 5786976 - 5787227 | 9128.15 |
| cyclopropane-fatty-acyl-phospholipid synthase | C1I57_35665 | Not Available | Negative | 5787267 - 5787389 | 4711.75 |
| riboflavin synthase | C1I57_35670 | Not Available | Positive | 5787390 - 5787641 | 9128.15 |
| cyclopropane-fatty-acyl-phospholipid synthase | C1I57_35675 | Not Available | Negative | 5787681 - 5787803 | 4711.75 |
| bifunctional 2-methylcitrate dehydratase/aconitate hydratase | C1I57_35680 | Not Available | Positive | 5787804 - 5788216 | 15153.1 |
| hypothetical protein | C1I57_35685 | Not Available | Negative | 5788217 - 5788629 | 15078.2 |
| ferrochelatase | C1I57_35690 | Not Available | Positive | 5788630 - 5788812 | 6669.03 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





