Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | C1I57_35585 | Not Available | Positive | 5781998 - 5782369 | 14497.5 |
| hypothetical protein | C1I57_35590 | Not Available | Negative | 5782404 - 5782585 | 6714.15 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | C1I57_35595 | Not Available | Negative | 5782821 - 5783236 | 14049.7 |
| hypothetical protein | C1I57_35600 | Not Available | Negative | 5783278 - 5783496 | 8648.59 |
| tagatose-bisphosphate aldolase | C1I57_35605 | Not Available | Positive | 5783535 - 5783652 | 4297.21 |
| yoah family protein | C1I57_35610 | Not Available | Positive | 5783653 - 5783723 | 2572.81 |
| hth-type transcriptional regulator metr | C1I57_35620 | Not Available | Positive | 5784069 - 5784484 | 15858.1 |
| hth-type transcriptional regulator metr | C1I57_35625 | Not Available | Positive | 5784485 - 5784900 | 15858.1 |
| tmao reductase two-component system sensor histidine kinase tors | C1I57_35630 | Not Available | Positive | 5784901 - 5785316 | 15566.8 |
| glutamate--cysteine ligase | C1I57_35635 | Not Available | Negative | 5785317 - 5785731 | 15465.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





