Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_01635 | Not Available | Positive | 307390 - 307557 | 6516.12 |
| phosphoenolpyruvate synthase | C1I57_01640 | Not Available | Positive | 307611 - 309989 | 87410.0 |
| cyclohexanecarboxylate-coa ligase | C1I57_01645 | Not Available | Negative | 310046 - 311692 | 60820.6 |
| ferredoxin family protein | C1I57_01650 | Not Available | Negative | 311749 - 312042 | 10699.8 |
| fad-dependent oxidoreductase | C1I57_01655 | Not Available | Negative | 312039 - 313328 | 45858.6 |
| electron transfer flavoprotein subunit alpha | C1I57_01660 | Not Available | Negative | 313383 - 314321 | 33951.9 |
| electron transfer flavoprotein | C1I57_01665 | Not Available | Negative | 314341 - 315105 | 27536.1 |
| hypothetical protein | C1I57_01670 | Not Available | Positive | 315142 - 315318 | 6451.92 |
| arac family transcriptional regulator | C1I57_01675 | Not Available | Positive | 315421 - 316332 | 34868.2 |
| acyl-coa dehydrogenase | C1I57_01680 | Not Available | Negative | 316375 - 317526 | 43004.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





