Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | C1I57_35220 | Not Available | Negative | 5752932 - 5753368 | 16342.9 |
| diguanylate cyclase | C1I57_35225 | Not Available | Positive | 5753369 - 5753805 | 16369.8 |
| alpha,alpha-phosphotrehalase | C1I57_35230 | Not Available | Negative | 5753988 - 5754242 | 9973.96 |
| alpha,alpha-phosphotrehalase | C1I57_35235 | Not Available | Negative | 5754425 - 5754679 | 10029.0 |
| oxidoreductase | C1I57_35240 | Not Available | Positive | 5754680 - 5755116 | 15543.5 |
| hypothetical protein | C1I57_35260 | Not Available | Negative | 5756921 - 5756986 | 2609.36 |
| hypothetical protein | C1I57_35265 | Not Available | Positive | 5757058 - 5757295 | 8706.41 |
| maltodextrin phosphorylase | C1I57_35270 | Not Available | Negative | 5757296 - 5757730 | 16750.4 |
| voc family protein | C1I57_35275 | Not Available | Positive | 5757731 - 5758072 | 12367.5 |
| hypothetical protein | C1I57_35280 | Not Available | Negative | 5758226 - 5758291 | 2643.37 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





