Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | C1I57_34965 | Not Available | Positive | 5733884 - 5734332 | 16223.1 |
| hypothetical protein | C1I57_34970 | Not Available | Positive | 5734339 - 5734781 | 15846.3 |
| hypothetical protein | C1I57_34975 | Not Available | Positive | 5734788 - 5735230 | 15785.3 |
| transcription-repair coupling factor | C1I57_34980 | Not Available | Negative | 5735231 - 5735670 | 16436.0 |
| phosphonate metabolism protein phnp | C1I57_34985 | Not Available | Positive | 5735680 - 5736128 | 17020.2 |
| amino acid abc transporter atp-binding protein | C1I57_34990 | Not Available | Positive | 5736129 - 5736350 | 8295.06 |
| mechanosensitive channel domain protein | C1I57_34995 | Not Available | Positive | 5736467 - 5736577 | 3933.8 |
| amino acid abc transporter atp-binding protein | C1I57_35000 | Not Available | Positive | 5736578 - 5736799 | 8295.06 |
| mechanosensitive channel domain protein | C1I57_35005 | Not Available | Positive | 5736916 - 5737026 | 3933.8 |
| thiamine abc transporter permease | C1I57_35015 | Not Available | Positive | 5737311 - 5737474 | 6062.76 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





