Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | C1I57_34615 | Not Available | Negative | 5701871 - 5702348 | 17229.6 |
| hypothetical protein | C1I57_34620 | Not Available | Positive | 5702349 - 5702826 | 17756.6 |
| ribonucleotide-diphosphate reductase subunit beta | C1I57_34625 | Not Available | Positive | 5702827 - 5703302 | 17959.3 |
| hypothetical protein | C1I57_34630 | Not Available | Positive | 5703324 - 5703778 | 16179.7 |
| hypothetical protein | C1I57_34635 | Not Available | Negative | 5703964 - 5704254 | 10140.8 |
| hypothetical protein | C1I57_34640 | Not Available | Negative | 5704440 - 5704730 | 10280.9 |
| phage tail tape measure protein | C1I57_34645 | Not Available | Positive | 5704731 - 5705206 | 18000.0 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | C1I57_34650 | Not Available | Negative | 5705316 - 5705681 | 13236.9 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | C1I57_34655 | Not Available | Negative | 5705791 - 5706156 | 13236.9 |
| hypothetical protein | C1I57_34660 | Not Available | Negative | 5706266 - 5706631 | 13074.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





