Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | C1I57_34210 | Not Available | Negative | 5668133 - 5668438 | 11490.5 |
| hypothetical protein | C1I57_34215 | Not Available | Negative | 5668439 - 5668629 | 7093.29 |
| iclr family transcriptional regulator | C1I57_34220 | Not Available | Negative | 5668644 - 5668949 | 11490.5 |
| hypothetical protein | C1I57_34225 | Not Available | Positive | 5668950 - 5669458 | 18991.6 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C1I57_34230 | Not Available | Negative | 5669459 - 5669967 | 18757.6 |
| hypothetical protein | C1I57_34235 | Not Available | Positive | 5669968 - 5670476 | 18512.4 |
| ash-like/host cell division inhibitor icd-like protein | C1I57_34240 | Not Available | Positive | 5670477 - 5670982 | 18214.1 |
| zinc/cadmium/mercury/lead-transporting atpase | C1I57_34245 | Not Available | Negative | 5670983 - 5671487 | 17534.3 |
| hypothetical protein | C1I57_34250 | Not Available | Negative | 5671535 - 5671992 | 16491.9 |
| molecular chaperone | C1I57_34255 | Not Available | Negative | 5671993 - 5672127 | 5017.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





