Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspi | C1I57_34110 | Not Available | Negative | 5659147 - 5659451 | 11186.7 |
| type ii secretion system protein gsph | C1I57_34115 | Not Available | Negative | 5659448 - 5659669 | 8385.08 |
| ion channel protein | C1I57_34120 | Not Available | Negative | 5659670 - 5660190 | 18234.8 |
| fatty acid oxidation complex subunit alpha fadb | C1I57_34125 | Not Available | Positive | 5660191 - 5660701 | 19229.0 |
| biotin synthase biob | C1I57_34130 | Not Available | Negative | 5660710 - 5661227 | 18932.8 |
| flagellum-specific atp synthase flii | C1I57_34135 | Not Available | Negative | 5661228 - 5661745 | 18602.6 |
| diguanylate cyclase | C1I57_34140 | Not Available | Positive | 5661746 - 5662263 | 18963.6 |
| protease | C1I57_34145 | Not Available | Positive | 5662264 - 5662781 | 19917.7 |
| family 65 glycosyl hydrolase | C1I57_34150 | Not Available | Negative | 5662782 - 5663298 | 18911.3 |
| 6-phosphofructokinase ii | C1I57_34155 | Not Available | Negative | 5663392 - 5663814 | 14646.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





