Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease tldd | C1I57_34010 | Not Available | Negative | 5648592 - 5649124 | 18805.4 |
| bene family transporter ydco | C1I57_34015 | Not Available | Negative | 5649125 - 5649657 | 18322.1 |
| bene family transporter ydco | C1I57_34020 | Not Available | Negative | 5649658 - 5650190 | 18354.2 |
| phosphomannomutase cpsg | C1I57_34025 | Not Available | Positive | 5650191 - 5650721 | 19573.5 |
| hypothetical protein | C1I57_34030 | Not Available | Negative | 5650722 - 5651014 | 10932.0 |
| host specificity protein j | C1I57_34035 | Not Available | Negative | 5651252 - 5651781 | 18922.2 |
| hypothetical protein | C1I57_34040 | Not Available | Negative | 5652311 - 5652603 | 10919.0 |
| galactitol-1-phosphate 5-dehydrogenase | C1I57_34045 | Not Available | Negative | 5652840 - 5653367 | 18487.3 |
| formate dehydrogenase accessory protein fdhe | C1I57_34050 | Not Available | Negative | 5653368 - 5653894 | 19465.2 |
| colanic acid biosynthesis glycosyltransferase wcaa | C1I57_34055 | Not Available | Positive | 5653895 - 5654421 | 20989.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





