Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putrescine abc transporter permease poth | C1I57_33960 | Not Available | Negative | 5643790 - 5644235 | 16616.8 |
| spermidine/putrescine abc transporter | C1I57_33965 | Not Available | Negative | 5644245 - 5644325 | 2998.61 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C1I57_33970 | Not Available | Negative | 5644326 - 5644860 | 19800.5 |
| sugar kinase | C1I57_33975 | Not Available | Positive | 5644861 - 5645393 | 19494.0 |
| hypothetical protein | C1I57_33980 | Not Available | Positive | 5645394 - 5645926 | 19493.1 |
| hypothetical protein | C1I57_33985 | Not Available | Positive | 5645927 - 5646190 | 10002.0 |
| two-component system sensor histidine kinase kdbd | C1I57_33990 | Not Available | Positive | 5646460 - 5646992 | 19568.9 |
| hypothetical protein | C1I57_33995 | Not Available | Positive | 5646993 - 5647223 | 8863.61 |
| metalloprotease tldd | C1I57_34000 | Not Available | Negative | 5647526 - 5648058 | 18805.4 |
| phosphoethanolamine transferase epta | C1I57_34005 | Not Available | Positive | 5648104 - 5648591 | 18005.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





