Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter atp-binding protein oppf | C1I57_33655 | Not Available | Negative | 5615684 - 5615796 | 4367.36 |
| abc transporter atp-binding protein | C1I57_33660 | Not Available | Negative | 5615793 - 5616251 | 16814.7 |
| pts galactitol transporter subunit iic | C1I57_33665 | Not Available | Positive | 5616252 - 5616818 | 19751.1 |
| rna polymerase sigma factor rpoh | C1I57_33670 | Not Available | Negative | 5616819 - 5617135 | 11718.2 |
| intimin-like inverse autotransporter protein sinh | C1I57_33675 | Not Available | Positive | 5617386 - 5617951 | 21195.6 |
| duf3300 domain-containing protein | C1I57_33680 | Not Available | Negative | 5617952 - 5618509 | 19722.3 |
| duf3300 domain-containing protein | C1I57_33685 | Not Available | Negative | 5618517 - 5619081 | 19930.5 |
| hypothetical protein | C1I57_33690 | Not Available | Positive | 5619102 - 5619383 | 10505.8 |
| conjugal transfer protein trar | C1I57_33695 | Not Available | Positive | 5619482 - 5619646 | 6227.43 |
| hypothetical protein | C1I57_33700 | Not Available | Positive | 5619647 - 5620018 | 13369.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





