Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colanic acid biosynthesis glycosyltransferase wcai | C1I57_33605 | Not Available | Positive | 5610515 - 5611094 | 21559.1 |
| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | C1I57_33610 | Not Available | Positive | 5611095 - 5611674 | 20736.8 |
| pyrimidine utilization transport protein g | C1I57_33615 | Not Available | Negative | 5611675 - 5612251 | 19494.3 |
| oxygen-independent coproporphyrinogen iii oxidase | C1I57_33620 | Not Available | Positive | 5612252 - 5612749 | 18959.8 |
| derepression protein | C1I57_33625 | Not Available | Negative | 5612995 - 5613282 | 10965.1 |
| ash-like/host cell division inhibitor icd-like protein | C1I57_33630 | Not Available | Negative | 5613275 - 5613400 | 4620.7 |
| adhesin | C1I57_33635 | Not Available | Positive | 5613401 - 5613974 | 19111.5 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | C1I57_33640 | Not Available | Negative | 5613975 - 5614294 | 11585.0 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | C1I57_33645 | Not Available | Positive | 5614547 - 5615115 | 20681.6 |
| 4-alpha-glucanotransferase | C1I57_33650 | Not Available | Positive | 5615116 - 5615499 | 14390.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





