Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_33505 | Not Available | Negative | 5601920 - 5602267 | 13376.8 |
| fe-s protein assembly chaperone hsca | C1I57_33510 | Not Available | Negative | 5602338 - 5602927 | 21156.9 |
| non-ribosomal peptide synthetase | C1I57_33515 | Not Available | Negative | 5602928 - 5603517 | 22476.1 |
| biotin synthase | C1I57_33520 | Not Available | Positive | 5603518 - 5603594 | 2799.16 |
| 8-amino-7-oxononanoate synthase | C1I57_33525 | Not Available | Positive | 5603591 - 5604104 | 18709.2 |
| ribonuclease iii | C1I57_33530 | Not Available | Negative | 5604105 - 5604691 | 22240.7 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | C1I57_33535 | Not Available | Negative | 5604692 - 5605277 | 21540.1 |
| autotransporter adhesin ag43 | C1I57_33540 | Not Available | Positive | 5605278 - 5605862 | 19452.6 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | C1I57_33545 | Not Available | Positive | 5605863 - 5606276 | 15733.9 |
| undecaprenyl-diphosphatase | C1I57_33550 | Not Available | Negative | 5606356 - 5606445 | 3453.44 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





