Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | C1I57_33455 | Not Available | Negative | 5596974 - 5597572 | 22237.3 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | C1I57_33460 | Not Available | Negative | 5597573 - 5598171 | 22199.2 |
| elongation factor 4 | C1I57_33465 | Not Available | Positive | 5598172 - 5598769 | 21681.1 |
| imidazole glycerol phosphate synthase subunit hish | C1I57_33470 | Not Available | Positive | 5598770 - 5598886 | 4233.0 |
| 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase | C1I57_33475 | Not Available | Positive | 5598886 - 5599367 | 17272.7 |
| sugar kinase | C1I57_33480 | Not Available | Negative | 5599368 - 5599963 | 21590.9 |
| histidinol dehydrogenase | C1I57_33485 | Not Available | Positive | 5599964 - 5600554 | 20953.6 |
| duf480 domain-containing protein | C1I57_33490 | Not Available | Positive | 5600560 - 5600625 | 2362.85 |
| virulence factor mvim | C1I57_33495 | Not Available | Positive | 5600627 - 5601153 | 19258.3 |
| intimin-like inverse autotransporter protein sinh | C1I57_33500 | Not Available | Positive | 5601154 - 5601746 | 22219.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





