Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage portal protein | C1I57_33355 | Not Available | Positive | 5587257 - 5587645 | 14926.7 |
| hypothetical protein | C1I57_33360 | Not Available | Positive | 5587635 - 5587870 | 8620.53 |
| formate dehydrogenase subunit alpha | C1I57_33365 | Not Available | Negative | 5587871 - 5588483 | 22037.0 |
| formate dehydrogenase subunit alpha | C1I57_33370 | Not Available | Negative | 5588484 - 5589096 | 22066.0 |
| phosphoenolpyruvate--protein phosphotransferase | C1I57_33375 | Not Available | Negative | 5589117 - 5589707 | 22050.4 |
| dna topoisomerase iii | C1I57_33380 | Not Available | Positive | 5589708 - 5590318 | 22940.2 |
| dna topoisomerase iii | C1I57_33385 | Not Available | Positive | 5590319 - 5590929 | 22882.1 |
| thiosulfate reductase electron transport protein phsb | C1I57_33390 | Not Available | Negative | 5590930 - 5591012 | 2925.68 |
| hypothetical protein | C1I57_33395 | Not Available | Negative | 5591076 - 5591537 | 17526.6 |
| ribulokinase | C1I57_33400 | Not Available | Negative | 5591566 - 5592144 | 20641.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





