Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | C1I57_33250 | Not Available | Positive | 5576704 - 5577308 | 22629.1 |
| arac family transcriptional regulator | C1I57_33255 | Not Available | Negative | 5577392 - 5577939 | 20519.0 |
| bifunctional udp-glucuronic acid oxidase/udp-4-amino-4-deoxy-l-arabinose formyltransferase | C1I57_33260 | Not Available | Positive | 5577940 - 5578281 | 13138.4 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | C1I57_33265 | Not Available | Positive | 5578278 - 5578567 | 10971.4 |
| l-ribulose-5-phosphate 4-epimerase | C1I57_33270 | Not Available | Negative | 5578568 - 5578833 | 10044.0 |
| xylulose 5-phosphate 3-epimerase | C1I57_33275 | Not Available | Negative | 5578833 - 5579195 | 13321.8 |
| hypothetical protein | C1I57_33280 | Not Available | Positive | 5579196 - 5579348 | 5609.88 |
| hypothetical protein | C1I57_33285 | Not Available | Negative | 5579386 - 5579616 | 8266.96 |
| duf933 domain-containing protein | C1I57_33290 | Not Available | Negative | 5579752 - 5579822 | 2562.1 |
| l-serine ammonia-lyase | C1I57_33295 | Not Available | Negative | 5579966 - 5580448 | 16854.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





