Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| attp region and p4int integrase | C1I57_33200 | Not Available | Positive | 5572507 - 5572653 | 5653.72 |
| beta-3-deoxy-d-manno-oct-2-ulosonic acid transferase | C1I57_33205 | Not Available | Negative | 5572999 - 5573493 | 18936.1 |
| sulfoxide reductase heme-binding subunit yedz | C1I57_33210 | Not Available | Positive | 5573494 - 5573711 | 8329.64 |
| metal-binding protein zint | C1I57_33215 | Not Available | Positive | 5573968 - 5574131 | 5932.12 |
| aminopeptidase | C1I57_33220 | Not Available | Negative | 5574287 - 5574769 | 17700.3 |
| antirestriction protein | C1I57_33225 | Not Available | Negative | 5574770 - 5575203 | 16386.4 |
| antirestriction protein | C1I57_33230 | Not Available | Negative | 5575297 - 5575406 | 3866.55 |
| fad:protein fmn transferase apbe | C1I57_33235 | Not Available | Positive | 5575553 - 5576040 | 17777.4 |
| aminodeoxychorismate synthase component i | C1I57_33240 | Not Available | Negative | 5576041 - 5576415 | 14094.7 |
| yoah family protein | C1I57_33245 | Not Available | Positive | 5576489 - 5576668 | 6554.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





