Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curli production assembly/transport protein csgg | C1I57_33095 | Not Available | Positive | 5563175 - 5563408 | 8801.61 |
| hypothetical protein | C1I57_33100 | Not Available | Negative | 5563472 - 5563824 | 12234.4 |
| choline dehydrogenase | C1I57_33105 | Not Available | Positive | 5563825 - 5564474 | 23987.2 |
| glycoside hydrolase family 65 protein | C1I57_33110 | Not Available | Positive | 5564475 - 5564657 | 6608.83 |
| beta-phosphoglucomutase | C1I57_33115 | Not Available | Positive | 5564654 - 5565123 | 17333.9 |
| is1 family transposase | C1I57_33120 | Not Available | Negative | 5565124 - 5565199 | 2428.85 |
| prephenate dehydratase | C1I57_33125 | Not Available | Positive | 5565241 - 5565432 | 7387.93 |
| iron abc transporter substrate-binding protein | C1I57_33130 | Not Available | Positive | 5565555 - 5565772 | 7588.32 |
| glycosyl hydrolase family 65 | C1I57_33135 | Not Available | Positive | 5565773 - 5565955 | 6590.76 |
| sugar kinase | C1I57_33145 | Not Available | Negative | 5566421 - 5567067 | 23672.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





