Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_33040 | Not Available | Negative | 5558617 - 5558885 | 9342.78 |
| penicillin-insensitive murein endopeptidase | C1I57_33045 | Not Available | Negative | 5558885 - 5559269 | 14325.3 |
| dimethyl sulfoxide reductase subunit b | C1I57_33050 | Not Available | Positive | 5559281 - 5559898 | 22870.1 |
| dimethylsulfoxide reductase, chain b | C1I57_33055 | Not Available | Positive | 5559933 - 5560550 | 22828.0 |
| curli production assembly/transport protein csgg | C1I57_33060 | Not Available | Positive | 5560574 - 5560807 | 8801.61 |
| hypothetical protein | C1I57_33065 | Not Available | Negative | 5560872 - 5561224 | 12264.4 |
| lipoate--protein ligase | C1I57_33070 | Not Available | Positive | 5561225 - 5561329 | 3907.65 |
| xre family transcriptional regulator | C1I57_33075 | Not Available | Positive | 5561361 - 5561624 | 9901.29 |
| purine-nucleoside phosphorylase | C1I57_33080 | Not Available | Negative | 5561785 - 5561874 | 3252.82 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | C1I57_33085 | Not Available | Positive | 5561875 - 5562524 | 23472.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





