Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine permease purp | C1I57_32785 | Not Available | Positive | 5532555 - 5533237 | 23948.6 |
| hypothetical protein | C1I57_32790 | Not Available | Negative | 5533238 - 5533512 | 10355.7 |
| abc transporter atp-binding protein | C1I57_32795 | Not Available | Negative | 5533509 - 5533919 | 14948.0 |
| hypothetical protein | C1I57_32800 | Not Available | Negative | 5533920 - 5534194 | 10302.6 |
| abc transporter atp-binding protein | C1I57_32805 | Not Available | Negative | 5534191 - 5534601 | 14929.9 |
| duf1198 domain-containing protein | C1I57_32810 | Not Available | Negative | 5534638 - 5535090 | 17220.1 |
| phage tail protein | C1I57_32815 | Not Available | Negative | 5535284 - 5535564 | 9995.93 |
| hypothetical protein | C1I57_32820 | Not Available | Negative | 5535716 - 5535964 | 8778.94 |
| porin ompc | C1I57_32830 | Not Available | Positive | 5536645 - 5537282 | 23150.6 |
| is200/is605 family transposase | C1I57_32835 | Not Available | Negative | 5537434 - 5537943 | 19844.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





