Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsx | C1I57_32735 | Not Available | Positive | 5527072 - 5527689 | 22209.4 |
| adenine permease purp | C1I57_32740 | Not Available | Positive | 5527761 - 5528449 | 23743.7 |
| type vi secretion system protein tssa | C1I57_32745 | Not Available | Positive | 5528477 - 5529135 | 24522.3 |
| hypothetical protein | C1I57_32750 | Not Available | Negative | 5529197 - 5529388 | 7123.84 |
| mfs transporter | C1I57_32755 | Not Available | Positive | 5529387 - 5529820 | 15481.3 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | C1I57_32760 | Not Available | Positive | 5529821 - 5530087 | 9677.55 |
| serine o-acetyltransferase | C1I57_32765 | Not Available | Negative | 5530142 - 5530504 | 12291.8 |
| exodeoxyribonuclease v subunit alpha | C1I57_32770 | Not Available | Negative | 5530505 - 5531166 | 24009.0 |
| type vi secretion system membrane subunit tssm | C1I57_32775 | Not Available | Positive | 5531189 - 5531871 | 25710.2 |
| type vi secretion system membrane subunit tssm | C1I57_32780 | Not Available | Positive | 5531872 - 5532554 | 25678.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





