Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| microcin j25 efflux abc transporter yoji | C1I57_32685 | Not Available | Negative | 5521529 - 5522228 | 26106.5 |
| hypothetical protein | C1I57_32690 | Not Available | Negative | 5522229 - 5522923 | 25907.0 |
| duf945 domain-containing protein | C1I57_32695 | Not Available | Positive | 5522924 - 5523562 | 24128.0 |
| antirestriction protein | C1I57_32700 | Not Available | Positive | 5523523 - 5523618 | 3270.79 |
| thiosulfate reductase electron transport protein phsb | C1I57_32705 | Not Available | Negative | 5523648 - 5524283 | 23706.2 |
| thiosulfate reductase electron transport protein phsb | C1I57_32710 | Not Available | Negative | 5524340 - 5524975 | 23785.2 |
| multifunctional cca trna nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase | C1I57_32715 | Not Available | Positive | 5525003 - 5525416 | 15717.9 |
| undecaprenyl-diphosphatase | C1I57_32720 | Not Available | Negative | 5525604 - 5525693 | 3453.44 |
| adenine permease purp | C1I57_32725 | Not Available | Positive | 5525694 - 5526382 | 23743.7 |
| cell division protein ftsx | C1I57_32730 | Not Available | Positive | 5526383 - 5527000 | 22209.4 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





