Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_32525 | Not Available | Negative | 5504436 - 5504666 | 8688.4 |
| alcohol dehydrogenase | C1I57_32530 | Not Available | Negative | 5504685 - 5505155 | 17320.4 |
| hypothetical protein | C1I57_32535 | Not Available | Negative | 5505156 - 5505874 | 27547.1 |
| hypothetical protein | C1I57_32540 | Not Available | Negative | 5505875 - 5506593 | 27431.0 |
| nadph-dependent 2,4-dienoyl-coa reductase | C1I57_32545 | Not Available | Positive | 5506716 - 5507312 | 21987.2 |
| lipid kinase yegs | C1I57_32550 | Not Available | Positive | 5507669 - 5508030 | 12629.3 |
| hypothetical protein | C1I57_32555 | Not Available | Negative | 5508031 - 5508277 | 8793.41 |
| hypothetical protein | C1I57_32560 | Not Available | Positive | 5508174 - 5508748 | 21228.0 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | C1I57_32565 | Not Available | Negative | 5508749 - 5509464 | 26600.1 |
| porin ompc | C1I57_32570 | Not Available | Positive | 5509465 - 5510138 | 24408.0 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





