Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_32475 | Not Available | Negative | 5499825 - 5500063 | 8858.1 |
| valine--trna ligase | C1I57_32480 | Not Available | Negative | 5500064 - 5500795 | 28123.2 |
| two-component-system connector protein safa | C1I57_32485 | Not Available | Positive | 5500964 - 5501161 | 7331.22 |
| arac family transcriptional regulator | C1I57_32490 | Not Available | Positive | 5501236 - 5501526 | 11139.5 |
| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase | C1I57_32495 | Not Available | Positive | 5501527 - 5501854 | 11447.5 |
| tryptophan synthase subunit beta | C1I57_32500 | Not Available | Positive | 5501866 - 5502257 | 14180.2 |
| hypothetical protein | C1I57_32505 | Not Available | Positive | 5502258 - 5502984 | 27357.7 |
| fe-s protein assembly chaperone hsca | C1I57_32510 | Not Available | Positive | 5502985 - 5503437 | 16109.9 |
| isc system 2fe-2s type ferredoxin | C1I57_32515 | Not Available | Positive | 5503439 - 5503710 | 9969.78 |
| 2-octaprenyl-6-methoxyphenyl hydroxylase | C1I57_32520 | Not Available | Positive | 5503711 - 5504435 | 26580.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





