Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(sec) selenium transferase | C1I57_32425 | Not Available | Positive | 5493383 - 5494128 | 26564.3 |
| capsular biosynthesis protein | C1I57_32430 | Not Available | Negative | 5494129 - 5494874 | 30212.0 |
| capsular biosynthesis protein | C1I57_32435 | Not Available | Negative | 5494875 - 5495620 | 30124.0 |
| glutathione abc transporter substrate-binding protein gsib | C1I57_32440 | Not Available | Negative | 5495621 - 5495946 | 11573.8 |
| hypothetical protein | C1I57_32445 | Not Available | Negative | 5495966 - 5496364 | 14856.1 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | C1I57_32450 | Not Available | Positive | 5496365 - 5496970 | 22239.2 |
| accessory colonization factor acfd | C1I57_32455 | Not Available | Negative | 5497108 - 5497850 | 27653.1 |
| type vi secretion system tip protein vgrg | C1I57_32460 | Not Available | Positive | 5497853 - 5498591 | 28196.2 |
| acetyltransferase | C1I57_32465 | Not Available | Negative | 5498592 - 5498934 | 12371.2 |
| cys-trna(pro) deacylase | C1I57_32470 | Not Available | Negative | 5499330 - 5499809 | 17123.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





