Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate permease glca | C1I57_32270 | Not Available | Negative | 5476531 - 5477312 | 27657.2 |
| alanine transaminase | C1I57_32275 | Not Available | Positive | 5477313 - 5478002 | 25635.1 |
| alanine transaminase | C1I57_32280 | Not Available | Positive | 5478093 - 5478782 | 25635.1 |
| type vi secretion system lipoprotein tssj | C1I57_32285 | Not Available | Negative | 5478873 - 5479313 | 16142.2 |
| type vi secretion system-associated fha domain protein tagh | C1I57_32290 | Not Available | Negative | 5479310 - 5479651 | 13299.7 |
| tmao reductase two-component system sensor histidine kinase tors | C1I57_32295 | Not Available | Negative | 5479652 - 5480430 | 28792.4 |
| accessory colonization factor acfd | C1I57_32300 | Not Available | Negative | 5480431 - 5481207 | 29454.1 |
| nadh-quinone oxidoreductase subunit l | C1I57_32305 | Not Available | Negative | 5481208 - 5481431 | 7952.74 |
| nadh-quinone oxidoreductase subunit k | C1I57_32310 | Not Available | Negative | 5481428 - 5481730 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | C1I57_32315 | Not Available | Negative | 5481727 - 5481981 | 8889.92 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





