Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | C1I57_32210 | Not Available | Negative | 5469087 - 5469434 | 12240.7 |
| hypothetical protein | C1I57_32215 | Not Available | Positive | 5469435 - 5469980 | 19030.2 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C1I57_32230 | Not Available | Positive | 5471021 - 5471566 | 19073.3 |
| zinc/cadmium/mercury/lead-transporting atpase | C1I57_32235 | Not Available | Negative | 5471813 - 5472602 | 27721.0 |
| pts galactitol transporter subunit iic | C1I57_32240 | Not Available | Positive | 5472609 - 5473389 | 28030.4 |
| duf466 domain-containing protein | C1I57_32245 | Not Available | Positive | 5473457 - 5473654 | 7467.89 |
| oxidoreductase | C1I57_32250 | Not Available | Negative | 5473664 - 5474176 | 18354.0 |
| outer membrane-stress sensor serine endopeptidase degs | C1I57_32255 | Not Available | Positive | 5474177 - 5474961 | 27418.1 |
| outer membrane-stress sensor serine endopeptidase degs | C1I57_32260 | Not Available | Positive | 5474962 - 5475746 | 27491.2 |
| vancomycin high temperature exclusion protein | C1I57_32265 | Not Available | Positive | 5475848 - 5476530 | 25339.2 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





