Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | C1I57_32160 | Not Available | Positive | 5463963 - 5464615 | 23579.1 |
| hypothetical protein | C1I57_32165 | Not Available | Negative | 5464616 - 5464797 | 6714.15 |
| type vi secretion system tube protein hcp | C1I57_32170 | Not Available | Negative | 5464989 - 5465423 | 16563.3 |
| 2-methylcitrate dehydratase | C1I57_32175 | Not Available | Negative | 5465424 - 5465569 | 5628.67 |
| 2-methylcitrate synthase | C1I57_32180 | Not Available | Negative | 5465603 - 5466230 | 23399.0 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | C1I57_32185 | Not Available | Positive | 5466231 - 5466758 | 19315.8 |
| chorismate synthase | C1I57_32190 | Not Available | Positive | 5466793 - 5467034 | 8597.19 |
| autotransporter domain-containing protein | C1I57_32195 | Not Available | Positive | 5467035 - 5467799 | 27683.9 |
| m48 family peptidase | C1I57_32200 | Not Available | Positive | 5468083 - 5468586 | 19456.6 |
| phosphoribosylamine--glycine ligase | C1I57_32205 | Not Available | Negative | 5468639 - 5469075 | 15317.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





