Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | C1I57_32060 | Not Available | Negative | 5454022 - 5454842 | 29818.3 |
| sensor protein zras | C1I57_32065 | Not Available | Negative | 5454843 - 5455223 | 14007.2 |
| zinc resistance-associated protein | C1I57_32070 | Not Available | Positive | 5455330 - 5455458 | 4953.71 |
| zinc resistance-associated protein zrap | C1I57_32075 | Not Available | Positive | 5455461 - 5455663 | 7452.96 |
| is6 family transposase is15div | C1I57_32080 | Not Available | Negative | 5455716 - 5456420 | 27896.9 |
| ail/lom family protein | C1I57_32085 | Not Available | Positive | 5456484 - 5456957 | 17391.7 |
| phage tail protein | C1I57_32090 | Not Available | Positive | 5457022 - 5457302 | 9951.82 |
| type i toxin-antitoxin system ibs family toxin | C1I57_32095 | Not Available | Positive | 5457557 - 5457616 | 2219.08 |
| 5-formyltetrahydrofolate cyclo-ligase | C1I57_32100 | Not Available | Negative | 5457717 - 5458118 | 15515.9 |
| pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | C1I57_32105 | Not Available | Negative | 5458119 - 5458933 | 27720.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





