Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Injection protein | C1I57_01295 | Not Available | Positive | 248296 - 248988 | 23711.8 |
| Injection protein | C1I57_01300 | Not Available | Positive | 248999 - 250348 | 48859.3 |
| Ejection protein | C1I57_01305 | Not Available | Positive | 250348 - 252507 | 74255.4 |
| Hypothetical protein | C1I57_01310 | Not Available | Negative | 252508 - 252831 | 12248.7 |
| hypothetical protein | C1I57_01315 | Not Available | Negative | 252854 - 253273 | 15785.2 |
| hypothetical protein | C1I57_01320 | Not Available | Negative | 253258 - 253839 | 21946.0 |
| Mnt protein | C1I57_01325 | Not Available | Negative | 253900 - 254148 | 9599.64 |
| Regulatory protein | C1I57_01330 | Not Available | Negative | 254172 - 254429 | 9765.71 |
| Hypothetical protein | C1I57_01335 | Not Available | Positive | 254535 - 254675 | 5406.83 |
| hypothetical protein | C1I57_01340 | Not Available | Positive | 254672 - 254875 | 7440.72 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





