Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| piln family type ivb pilus formation outer membrane protein | C1I57_00375 | Not Available | Negative | 66797 - 68416 | 57515.6 |
| pilm | C1I57_00380 | Not Available | Negative | 68447 - 68884 | 16233.4 |
| pilus assembly protein | C1I57_00385 | Not Available | Negative | 68889 - 69959 | 38831.6 |
| hypothetical protein | C1I57_00390 | Not Available | Negative | 70116 - 70451 | 12494.9 |
| pilus assembly protein pili | C1I57_00395 | Not Available | Negative | 70568 - 70885 | 12328.1 |
| flotillin family protein | C1I57_00400 | Not Available | Negative | 70891 - 72585 | 61838.4 |
| duf1449 domain-containing protein | C1I57_00405 | Not Available | Negative | 72612 - 73232 | 22314.8 |
| conjugal transfer protein trac | C1I57_00410 | Not Available | Negative | 73386 - 73535 | 5730.87 |
| trac | C1I57_00415 | Not Available | Negative | 73499 - 74164 | 25030.9 |
| transcription termination factor nusg | C1I57_00420 | Not Available | Negative | 74305 - 74946 | 24619.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





