Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C1I57_01245 | Not Available | Positive | 238729 - 239169 | 16760.8 |
| Terminase large subunit | C1I57_01250 | Not Available | Positive | 239166 - 240581 | 53019.1 |
| Portal protein | C1I57_01255 | Not Available | Positive | 240583 - 242781 | 81674.2 |
| Capsid and scaffold protein | C1I57_01260 | Not Available | Positive | 242872 - 243765 | 33610.2 |
| Coat protein | C1I57_01265 | Not Available | Positive | 243784 - 245037 | 44861.3 |
| Hypothetical protein | C1I57_01270 | Not Available | Positive | 245079 - 245267 | 6946.23 |
| Dna stabilization protein | C1I57_01275 | Not Available | Positive | 245248 - 245709 | 16623.7 |
| Dna stabilization protein | C1I57_01280 | Not Available | Positive | 245719 - 247137 | 52283.8 |
| Tail accessory protein | C1I57_01285 | Not Available | Positive | 247137 - 247838 | 24994.3 |
| Head assembly protein | C1I57_01290 | Not Available | Positive | 247838 - 248293 | 17369.8 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





