Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_00220 | Not Available | Positive | 39707 - 40252 | 20979.7 |
| hypothetical protein | C1I57_00225 | Not Available | Negative | 40225 - 40605 | 14720.2 |
| conjugal transfer protein trat | C1I57_00230 | Not Available | Negative | 41023 - 41649 | 23790.9 |
| tras | C1I57_00235 | Not Available | Negative | 41756 - 42007 | 9133.8 |
| conjugal transfer protein trar | C1I57_00240 | Not Available | Negative | 42064 - 42462 | 13738.8 |
| conjugal transfer protein traq | C1I57_00245 | Not Available | Negative | 42509 - 43036 | 18073.3 |
| conjugal transfer protein | C1I57_00250 | Not Available | Negative | 43036 - 43749 | 26199.3 |
| conjugal transfer protein trao | C1I57_00255 | Not Available | Negative | 43746 - 45077 | 47020.4 |
| conjugal transfer protein tran | C1I57_00260 | Not Available | Negative | 45081 - 46055 | 34315.8 |
| conjugal transfer protein tram | C1I57_00265 | Not Available | Negative | 46066 - 46761 | 25504.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





