Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1705 domain-containing protein | C1I57_00170 | Not Available | Positive | 26766 - 28310 | 58167.2 |
| hypothetical protein | C1I57_00175 | Not Available | Negative | 28403 - 28645 | 8986.76 |
| hok/gef family protein | C1I57_00180 | Not Available | Positive | 28977 - 29129 | 5766.37 |
| rna polymerase subunit sigma | C1I57_00185 | Not Available | Negative | 29267 - 30853 | 60961.2 |
| ethanolamine utilization protein eute | C1I57_00190 | Not Available | Negative | 31127 - 31780 | 25256.0 |
| hypothetical protein | C1I57_00195 | Not Available | Negative | 31851 - 34016 | 77535.1 |
| conjugal transfer protein trax | C1I57_00200 | Not Available | Negative | 34089 - 34658 | 22003.4 |
| conjugal transfer protein | C1I57_00205 | Not Available | Negative | 34655 - 35860 | 42846.1 |
| conjugal transfer protein trav | C1I57_00210 | Not Available | Negative | 35821 - 36438 | 23430.2 |
| conjugal transfer protein | C1I57_00215 | Not Available | Negative | 36438 - 39482 | 114012.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





