Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_00130 | Not Available | Negative | 19219 - 19410 | 6956.33 |
| hypothetical protein | C1I57_00135 | Not Available | Negative | 19423 - 19785 | 14059.9 |
| hypothetical protein | C1I57_00140 | Not Available | Negative | 19796 - 19987 | 7310.85 |
| hypothetical protein | C1I57_00145 | Not Available | Positive | 19919 - 20128 | 7556.97 |
| autotransporter outer membrane beta-barrel domain-containing protein | C1I57_00150 | Not Available | Negative | 20291 - 24280 | 141919.0 |
| thermonuclease | C1I57_00155 | Not Available | Negative | 24747 - 25250 | 19376.5 |
| dna-binding protein | C1I57_00160 | Not Available | Positive | 25409 - 26032 | 23841.0 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 25981 - 26077 | Not Available |
| duf2569 domain-containing protein | C1I57_00165 | Not Available | Positive | 26120 - 26575 | 17299.8 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 26756 - 26863 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





