Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| relaxase nikb | C1I57_00090 | Not Available | Positive | 9447 - 12158 | 104532.0 |
| cell envelope integrity protein tola | C1I57_00095 | Not Available | Positive | 12226 - 12657 | 16141.3 |
| hypothetical protein | C1I57_00100 | Not Available | Negative | 12755 - 12985 | 8807.48 |
| hypothetical protein | C1I57_00105 | Not Available | Negative | 13045 - 13338 | 11208.7 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 13653 - 14029 | Not Available |
| conjugal transfer protein trbc | C1I57_00110 | Not Available | Negative | 13464 - 15767 | 87080.1 |
| dsbc family protein | C1I57_00115 | Not Available | Negative | 15748 - 16866 | 40208.0 |
| conjugal transfer protein trba | C1I57_00120 | Not Available | Negative | 16863 - 18143 | 48913.1 |
| Ncrna_class:other | Not Available | Not Available | Positive | 18310 - 18441 | Not Available |
| flagellar biosynthesis protein flgm | C1I57_00125 | Not Available | Negative | 18880 - 19191 | 12104.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





