Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C1I57_00045 | Not Available | Positive | 4712 - 4978 | 10481.9 |
| cobalamin biosynthesis protein cbix | C1I57_00050 | Not Available | Positive | 5169 - 5558 | 14778.2 |
| transposase | C1I57_00055 | Not Available | Positive | 5555 - 6493 | 35984.7 |
| hypothetical protein | C1I57_00060 | Not Available | Positive | 6493 - 6738 | 9182.12 |
| xre family transcriptional regulator | C1I57_00065 | Not Available | Negative | 6769 - 7020 | 9836.78 |
| hypothetical protein | C1I57_00070 | Not Available | Positive | 7261 - 7476 | 7715.31 |
| duf4942 domain-containing protein | C1I57_00075 | Not Available | Positive | 7601 - 8449 | 32297.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 8631 - 8746 | Not Available |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | C1I57_00080 | Not Available | Negative | 8535 - 8870 | 12432.7 |
| nika protein | C1I57_00085 | Not Available | Positive | 9103 - 9435 | 12731.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





