Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail length tape measure protein precursor | C1I57_20555 | Not Available | Positive | 3738739 - 3739563 | 29166.3 |
| Putative minor tail protein | C1I57_20560 | Not Available | Positive | 3739560 - 3739889 | 12615.2 |
| Putative tail protein | C1I57_20565 | Not Available | Positive | 3739889 - 3740587 | 25756.4 |
| Putative tail fiber component | C1I57_20570 | Not Available | Positive | 3740598 - 3741341 | 28174.4 |
| Putative tail component | C1I57_20575 | Not Available | Positive | 3741239 - 3741919 | 23802.9 |
| hypothetical protein | C1I57_20580 | Not Available | Negative | 3741992 - 3742183 | 7050.89 |
| Phage-related tail protein | C1I57_20585 | Not Available | Positive | 3742258 - 3744716 | 89933.2 |
| Tail component | C1I57_23970 | Not Available | Negative | 4260414 - 4261589 | 42022.7 |
| Tail component | C1I57_23975 | Not Available | Negative | 4261570 - 4261983 | 15239.0 |
| Tail component | C1I57_23980 | Not Available | Negative | 4262010 - 4262441 | 15724.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





