Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-tail joining protein | C1I57_16335 | Not Available | Negative | 3019996 - 3020349 | 12793.8 |
| Dna packaging protein | C1I57_16340 | Not Available | Negative | 3020361 - 3020756 | 13997.3 |
| Capsid component | C1I57_16345 | Not Available | Negative | 3020798 - 3021823 | 38102.3 |
| Head-dna stabilization protein | C1I57_16350 | Not Available | Negative | 3021878 - 3022210 | 11498.5 |
| Capsid component | C1I57_16355 | Not Available | Negative | 3022220 - 3023539 | 46027.6 |
| Capsid component | C1I57_16360 | Not Available | Negative | 3023520 - 3025121 | 59436.9 |
| Head-tail joining protein | C1I57_16365 | Not Available | Negative | 3025118 - 3025324 | 7598.22 |
| Dna packaging protein | C1I57_16370 | Not Available | Negative | 3025321 - 3027246 | 73248.5 |
| Dna packaging protein | C1I57_16375 | Not Available | Negative | 3027221 - 3027766 | 20425.2 |
| dna-packaging protein | C1I57_16380 | Not Available | Negative | 3027848 - 3028014 | 6088.31 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





