Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C1I57_01195 | Not Available | Positive | 234205 - 234495 | 10768.0 |
| Rusa-like protein | C1I57_01200 | Not Available | Positive | 234492 - 234854 | 14067.0 |
| Ninh protein | C1I57_01205 | Not Available | Positive | 234851 - 235039 | 6994.68 |
| Antitermination protein q | C1I57_01210 | Not Available | Positive | 235036 - 235554 | 19825.3 |
| Holin | C1I57_01215 | Not Available | Positive | 236151 - 236474 | 11422.0 |
| Lysin | C1I57_01220 | Not Available | Positive | 236458 - 236934 | 17881.2 |
| Gene 63 protein | C1I57_01225 | Not Available | Positive | 236931 - 237368 | 16233.4 |
| Hypothetical protein | C1I57_01230 | Not Available | Positive | 237356 - 237508 | 5782.38 |
| Rha family protein | C1I57_01235 | Not Available | Positive | 237714 - 238256 | 21100.8 |
| Duf2560 family protein | C1I57_01240 | Not Available | Positive | 238484 - 238726 | 9012.78 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





