Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ninb | C1I57_13780 | Not Available | Negative | 2559437 - 2559895 | 17380.8 |
| Exclusion protein | C1I57_13785 | Not Available | Negative | 2559951 - 2560241 | 10642.1 |
| Putative replication protein p | C1I57_13790 | Not Available | Negative | 2560238 - 2560939 | 26538.1 |
| Dna replication protein | C1I57_13795 | Not Available | Negative | 2560936 - 2561835 | 34000.4 |
| Regulatory protein cii | C1I57_13800 | Not Available | Negative | 2561868 - 2562164 | 11075.3 |
| Similar to c2 of bacteriophage l | C1I57_13805 | Not Available | Negative | 2562306 - 2562521 | 7771.41 |
| Ci protein | C1I57_13810 | Not Available | Positive | 2562597 - 2563292 | 25633.4 |
| hypothetical protein | C1I57_13815 | Not Available | Positive | 2563332 - 2563889 | 21809.7 |
| Gp47, conserved hypothetical protein | C1I57_13820 | Not Available | Positive | 2563886 - 2564638 | 28096.8 |
| Hypothetical protein | C1I57_13825 | Not Available | Positive | 2564915 - 2565097 | 7093.63 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





