Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SP-16 Combo |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1503507 bp
Thymine Count
1502171 bp
Guanine Count
1534771 bp
Cytosine Count
1540882 bp
Genome Length
6081331 bp
Protein-coding Genes
7256 genes
Non-Coding Genes
466 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Lysozyme protein r | C1I57_11370 | Not Available | Negative | 2102648 - 2103181 | 19491.3 |
| hypothetical protein | C1I57_11375 | Not Available | Positive | 2103287 - 2103559 | 10108.8 |
| Hypothetical protein | C1I57_11380 | Not Available | Negative | 2103525 - 2103869 | 12928.5 |
| Putative holin | C1I57_11385 | Not Available | Negative | 2103874 - 2104089 | 8006.69 |
| Hypothetical protein | C1I57_11390 | Not Available | Negative | 2104239 - 2104400 | 5641.88 |
| Hypothetical protein | C1I57_11395 | Not Available | Negative | 2104358 - 2104585 | 8332.03 |
| hypothetical protein | C1I57_11400 | Not Available | Negative | 2105126 - 2105347 | 8084.72 |
| Trna,type:arg,anti_codon:tct; | Not Available | Not Available | Positive | 2105561 - 2105637 | Not Available |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 2105735 - 2105810 | Not Available |
| Putative dna methylase | C1I57_11420 | Not Available | Negative | 2105860 - 2106909 | 39980.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





